The master version of this document is on github. This presentation is at shasum version 4c4d884 from that repository.
sessionInfo()
## R version 3.3.3 (2017-03-06) ## Platform: x86_64-apple-darwin13.4.0 (64-bit) ## Running under: macOS 10.13.6 ## ## locale: ## [1] en_NZ.UTF-8/en_NZ.UTF-8/en_NZ.UTF-8/C/en_NZ.UTF-8/en_NZ.UTF-8 ## ## attached base packages: ## [1] stats4 parallel stats graphics grDevices utils datasets ## [8] methods base ## ## other attached packages: ## [1] bindrcpp_0.2 lubridate_1.7.3 dbplyr_1.2.1 ## [4] dplyr_0.7.4.9000 RSQLite_2.0 hexbin_1.27.1 ## [7] GenomicRanges_1.24.3 GenomeInfoDb_1.8.7 IRanges_2.6.1 ## [10] S4Vectors_0.10.3 BiocGenerics_0.18.0 RLinuxModules_0.2 ## [13] lattice_0.20-35 ggplot2_2.2.1 iptools_0.4.0 ## ## loaded via a namespace (and not attached): ## [1] Rcpp_0.12.14 XVector_0.12.1 pillar_1.2.1 ## [4] plyr_1.8.4 bindr_0.1.1 zlibbioc_1.18.0 ## [7] pfrticles_0.2 AsioHeaders_1.11.0-1 tools_3.3.3 ## [10] bit_1.1-12 digest_0.6.15 memoise_1.1.0 ## [13] evaluate_0.10.1 tibble_1.4.2 gtable_0.2.0 ## [16] pkgconfig_2.0.1 rlang_0.2.0 DBI_0.8 ## [19] yaml_2.1.18 stringr_1.3.0 knitr_1.20 ## [22] tidyselect_0.2.4 bit64_0.9-7 rprojroot_1.3-2 ## [25] grid_3.3.3 glue_1.2.0 R6_2.2.2 ## [28] rmarkdown_1.9 purrr_0.2.4 blob_1.1.0 ## [31] magrittr_1.5 backports_1.1.2 scales_0.5.0 ## [34] ISOcodes_2017.09.27 htmltools_0.3.6 assertthat_0.2.0 ## [37] colorspace_1.3-2 stringi_1.1.7 lazyeval_0.2.1 ## [40] munsell_0.4.3